BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038E04LP1|AL430550
(910 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig682 1799 0.0
>3x_Contig682
Length = 2655
Score = 1799 bits (906), Expect = 0.0
Identities = 908/910 (99%)
Strand = Plus / Minus
Query: 1 gatctaacttttgtgaactcactctttaataaagtataatgaaacaccaattaatttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 gatctaacttttgtgaactcactctttaataaagtataatgaaacaccaattaatttatt 1295
Query: 61 gccgtacaagctgtctggcaatgtggtagttaatcatttcctctgtcttataatctttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1294 gccgtacaagctgtctggcaatgtggtagttaatcatttcctctgtcttataatctttgt 1235
Query: 121 taatccaaaattcttaaatttcaatctcaatagaaagggcaagataaatcgtttgavacg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1234 taatccaaaattcttaaatttcaatctcaatagaaagggcaagataaatcgtttgaaacg 1175
Query: 181 atattaaccaccccttttctctgatagaagaaatcgcacaaagaaggggacgtggtggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 atattaaccaccccttttctctgatagaagaaatcgcacaaagaaggggacgtggtggcc 1115
Query: 241 tgttcacatcgttgcgtacggtgtattcgggtaacttattcacgtgttaatgttttgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 tgttcacatcgttgcgtacggtgtattcgggtaacttattcacgtgttaatgttttgttt 1055
Query: 301 tgggtcacgtgagtcgccgtatatttctatctaggtgtcagtgccagtgccagcgtttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 tgggtcacgtgagtcgccgtatatttctatctaggtgtcagtgccagtgccagcgtttgt 995
Query: 361 atcgtctgtatcatccgaatctatttgamactatttgaataaatacacaagttaatttac 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 994 atcgtctgtatcatccgaatctatttgaaactatttgaataaatacacaagttaatttac 935
Query: 421 tcatccctttttcttaccgaaaaaactctcaagtgtacgttgactggagcgagccttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 tcatccctttttcttaccgaaaaaactctcaagtgtacgttgactggagcgagccttctt 875
Query: 481 tttctcgactggtgttgctggtttctttgacggttctgccgttttcgctgatttcacagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 tttctcgactggtgttgctggtttctttgacggttctgccgttttcgctgatttcacagg 815
Query: 541 ctttggtggtttcttcgtttctgtagctggtctcttagtaaccatgtatccatcttcgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 ctttggtggtttcttcgtttctgtagctggtctcttagtaaccatgtatccatcttcgtc 755
Query: 601 tatatatgtggtctgttctttcgattcgtggactggctcttctttttccttttccttttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tatatatgtggtctgttctttcgattcgtggactggctcttctttttccttttccttttc 695
Query: 661 cttttctggttgagatagttccattaaggattcgtctaccgtcgtgtcaagtagttcttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 cttttctggttgagatagttccattaaggattcgtctaccgtcgtgtcaagtagttcttc 635
Query: 721 taagtttgtgacagtgcggtctagatttactggttgtgattcttgtgaaggtactgattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 taagtttgtgacagtgcggtctagatttactggttgtgattcttgtgaaggtactgattc 575
Query: 781 tatcgctacagggtggtttacttcagcctcttcttcgctttcctctttcttatcacgctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tatcgctacagggtggtttacttcagcctcttcttcgctttcctctttcttatcacgctt 515
Query: 841 tttagaatttttatcgaattgggctaaatcatcgtcatcatcatcgtcaaacatcgaggc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tttagaatttttatcgaattgggctaaatcatcgtcatcatcatcgtcaaacatcgaggc 455
Query: 901 cagttggtcc 910
||||||||||
Sbjct: 454 cagttggtcc 445
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8000
Number of Sequences: 1807
Number of extensions: 8000
Number of successful extensions: 160
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)